The detailed information of tRNA gene sequence


Sequence ID>W1610000175
Genome IDAALU01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 35212
End posion on genome 35296
Amino Acid Pseudo
Anticodon TAG
Upstream region at tRNA start position 
tcttttttga
tRNA gene sequence 
GCGAGGATTGCCGAGCCAGGTCAAAGGCGACGGATTTAGGGTCCGTTCCCGAAGGGGTCC
GGGTGTTCAAATCGCCCTCCTCGCAttc
Downstream region at tRNA end position 
ttcatgaaac
Secondary structure (Cloverleaf model)
>W1610000175	Pseudo	TAG
                   a      Attc ttcatgaaac
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C C C G C     A
    C C G A        T      | | | + |     A
  A         G C C G       G G G T G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCGAAGGGGTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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