The detailed information of tRNA gene sequence


Sequence ID>W1610000177
Genome IDAALU01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 90285
End posion on genome 90210
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtcttctgaT
tRNA gene sequence 
GCCGGTGTGGCAGAGTGGCTGAATGCCTTCGCCTGCAAAGCGAATGTTTGGGGGTTCGAT
TCCCTCCGCCGGCGTtt
Downstream region at tRNA end position 
ctgctgggtg
Secondary structure (Cloverleaf model)
>W1610000177	Cys	GCA
                   T      GTtt ctgctgggtg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        C     TGTTT
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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