The detailed information of tRNA gene sequence


Sequence ID>W1610000184
Genome IDAALU01000015
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 51698
End posion on genome 51769
Amino Acid Pseudo
Anticodon GTG
Upstream region at tRNA start position 
ggtgcaacct
tRNA gene sequence 
GCCTGGGTGGGGTAATGGCTATCCTAAGGGATTGTGGTTCCCTCGATCTGGGTTCAATTC
CCGGTCCAGGCCtgt
Downstream region at tRNA end position 
ccgtttttat
Secondary structure (Cloverleaf model)
>W1610000184	Pseudo	GTG
                   t      Ctgt ccgtttttat
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C
                     G + T          T T
                    T     G G C C C     A
      T A A        G      | + | | |     A
    G       T G G G       C T G G G     C
    G         | | +                 T T
    C       T C C T
      T A          A     CGAT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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