The detailed information of tRNA gene sequence


Sequence ID>W1610000187
Genome IDAALU01000017
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 54004
End posion on genome 54078
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctaataaggc
tRNA gene sequence 
GGGCCGGTAGATCAGTGGGAGATCGCTACCTTGGCATGGTAGAGGCCGCGGGTTCAATTC
CCGCTCGGTCCATCA
Downstream region at tRNA end position 
gtttttacgt
Secondary structure (Cloverleaf model)
>W1610000187	Ala	GGC
                   c      ATCA gtttttacgt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G + T          T T
                    T     C G C C C     A
        G A        A      | | | | |     A
      T     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        G A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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