The detailed information of tRNA gene sequence


Sequence ID>W1610000188
Genome IDAALU01000017
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 54905
End posion on genome 54831
Amino Acid Pseudo
Anticodon TGG
Upstream region at tRNA start position 
tgtcccgcac
tRNA gene sequence 
GGGGTAATAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACCGCAGTTCAA
ATCTGCGTTACCCCAtct
Downstream region at tRNA end position 
tcttttatga
Secondary structure (Cloverleaf model)
>W1610000188	Pseudo	TGG
                   c      Atct tcttttatga
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T          T A
                    T     G C G T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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