The detailed information of tRNA gene sequence


Sequence ID>W1610000190
Genome IDAALU01000020
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 9358
End posion on genome 9443
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagcatctgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGTCTCGAAAACCACTGGTGGTAACACCTCG
GGAGTTCAAATCTCCCCTTCGGCGTtc
Downstream region at tRNA end position 
atttttaaga
Secondary structure (Cloverleaf model)
>W1610000190	Ser	CGA
                   T      GTtc atttttaaga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGGTAACACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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