The detailed information of tRNA gene sequence


Sequence ID>W1610000195
Genome IDAALU01000024
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 2911
End posion on genome 2827
Amino Acid Pseudo
Anticodon GAG
Upstream region at tRNA start position 
tgttcattga
tRNA gene sequence 
GCGAGGGTATCCGAGCCAGGTCAAAGGAGCAAGGTTGAGGGCCTTGTCGCGAAGGCGTTC
GAGCGTTCAAATCGCTTCCCTCGCAttc
Downstream region at tRNA end position 
ttcttaaaaa
Secondary structure (Cloverleaf model)
>W1610000195	Pseudo	GAG
                   a      Attc ttcttaaaaa
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T T C G C     A
    C C G A        A      + | | | |     A
  A         G C C T       G A G C G     C
  G           | | |                 T T
  G         A G G A
    T C A A        G     TCGCGAAGGCGTTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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