The detailed information of tRNA gene sequence


Sequence ID>W1610000199
Genome IDAALU01000034
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanospirillum hungatei JF-1 [AALU]
Start position on genome 27671
End posion on genome 27745
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
ataccaatga
tRNA gene sequence 
GGGGTCGTAGGGTAGCCTGGACCATCCTAGGGCGTTCGGGACGCTCTGACCTGAGTTCGA
ATCTCAGCGACCCCAttc
Downstream region at tRNA end position 
ttgtgccaac
Secondary structure (Cloverleaf model)
>W1610000199	Pseudo	CGG
                   a      Attc ttgtgccaac
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        A     TGAC
                    G - C
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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