The detailed information of tRNA gene sequence


Sequence ID>W1610000221
Genome IDAAOR01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix thermoacetophila PT [AAOR]
Start position on genome 9077
End posion on genome 9003
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtggtcttgc
tRNA gene sequence 
GGGCCTGTAGCTTAGTCCGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCGCCGGTTCAA
ATCCGGCCAGGCCCAtgt
Downstream region at tRNA end position 
ccactccata
Secondary structure (Cloverleaf model)
>W1610000221	Met	CAT
                   c      Atgt ccactccata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     A
  C         T T C G       G C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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