The detailed information of tRNA gene sequence


Sequence ID>W1610000222
Genome IDAAOR01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix thermoacetophila PT [AAOR]
Start position on genome 84032
End posion on genome 84120
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aatggcgagc
tRNA gene sequence 
GCGCCGATGGTCTAGCGGTTATGACTTGGGCCTTCCAAGCATCCCGAAGAAAGCCTACAA
CCCGGGTTCGAATCCCGGTCGGCGCATCA
Downstream region at tRNA end position 
ctattttgca
Secondary structure (Cloverleaf model)
>W1610000222	Gly	TCC
                   c      ATCA ctattttgca
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       T C T G       C C G G G     C
    G         | | |                 T T
    T       T G A C
      T A          T     CCGAAGAAAGCCTACAAC
                    T   C
                    G + T
                    G   A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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