The detailed information of tRNA gene sequence


Sequence ID>W1610000223
Genome IDAAOR01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix thermoacetophila PT [AAOR]
Start position on genome 108914
End posion on genome 109000
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaatgagcgg
tRNA gene sequence 
GCCGCCATAACTCAGTTGGTAGAGTGTCTGGCTGTTAATCCGGCAGATACCAGAATGTCA
CAGGTTCGAGCCCTGTTGGCGGCGCTA
Downstream region at tRNA end position 
ttgccacttt
Secondary structure (Cloverleaf model)
>W1610000223	Asn	GTT
                   g      GCTA ttgccacttt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          C G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C A       A C A G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     CAGATACCAGAATGTC
                    T + G
                    C - G
                    T   C
                    G - C
                    G + T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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