The detailed information of tRNA gene sequence


Sequence ID>W1610000226
Genome IDAAOR01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix thermoacetophila PT [AAOR]
Start position on genome 79918
End posion on genome 79995
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
attgctccgc
tRNA gene sequence 
GCTCCGGTAGTGTAGCTCGGCCAATCATGAAGGACTCTCACTCCTTCGACTAGGGTTCAA
ATCCCTACCGGAGCACTA
Downstream region at tRNA end position 
ttctccgatt
Secondary structure (Cloverleaf model)
>W1610000226	Glu	CTC
                   c      ACTA ttctccgatt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A T C C C     A
    T C G A        A      | | | | |     A
  C         T G T G       T A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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