The detailed information of tRNA gene sequence


Sequence ID>W1610000238
Genome IDAASI01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoculleus marisnigri JR1 [AASI]
Start position on genome 177009
End posion on genome 177082
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
gtaccaatga
tRNA gene sequence 
GGGGTCGTGGGGTAGCCTGGCCATCCTATGGCGTTCGGGATGCTGTGACCTGAGTTCAAA
TCTCAGCGACCCCAttt
Downstream region at tRNA end position 
tatcattaat
Secondary structure (Cloverleaf model)
>W1610000238	Pseudo	CGG
                   a      Attt tatcattaat
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        G      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    C C A          A     TGAC
                    T + G
                    G + T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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