The detailed information of tRNA gene sequence


Sequence ID>W1610000279
Genome IDAASJ01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum pendens Hrk 5 [AASJ]
Start position on genome 201017
End posion on genome 201113
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttgaactttg
tRNA gene sequence 
GCGGCCGTAGTCTAGTCTGGTAGGATGGCGGCCTGCCACGCCGCAGAGCCCTGTGTAGGC
GCGGAGAACCCGGGTTCAAATCCCGGCGGCCGCACCA
Downstream region at tRNA end position 
ctttttcacg
Secondary structure (Cloverleaf model)
>W1610000279	Gly	GCC
                   g      ACCA ctttttcacg
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     AGAGCCCTGTGTAGGCGCGGAGAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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