The detailed information of tRNA gene sequence


Sequence ID>W1610000281
Genome IDAASJ01000002
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum pendens Hrk 5 [AASJ]
Start position on genome 66393
End posion on genome 66489
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tctggctccg
tRNA gene sequence 
GCGGCCGTAGTCTAGTCTGGTAGGATGGCGGCCTTCCACGCCGCAGAGCCCTGTGTAGGC
GCGGAGAACCCGGGTTCAAATCCCGGCGGCCGCACCA
Downstream region at tRNA end position 
cttttccgcg
Secondary structure (Cloverleaf model)
>W1610000281	Gly	TCC
                   g      ACCA cttttccgcg
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     AGAGCCCTGTGTAGGCGCGGAGAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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