The detailed information of tRNA gene sequence


Sequence ID>W1610000283
Genome IDAASJ01000002
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum pendens Hrk 5 [AASJ]
Start position on genome 233238
End posion on genome 233316
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggttacgaa
tRNA gene sequence 
GCCGGGGTCGCCTAGCCTGGTCAAGGGCGCCGGACTCATAATCCGGTCTTCCCGGGTTCG
AATCCCGGCCCCGGCACCA
Downstream region at tRNA end position 
cggtattagt
Secondary structure (Cloverleaf model)
>W1610000283	Met	CAT
                   a      ACCA cggtattagt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     G
  T         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    T C A A        G     TCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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