The detailed information of tRNA gene sequence


Sequence ID>W1610000284
Genome IDAASJ01000002
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum pendens Hrk 5 [AASJ]
Start position on genome 234329
End posion on genome 234235
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tagaggctca
tRNA gene sequence 
GCGGCCGTAGTCTAGCCTGGTAGGATGGCGGCCTCCCAAGCCGCAGAGCCTTAAAGGCGC
GGAAAACCCGGGTTCAAATCCCGGCGGCCGCACCA
Downstream region at tRNA end position 
cttcccatct
Secondary structure (Cloverleaf model)
>W1610000284	Gly	CCC
                   a      ACCA cttcccatct
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     AGAGCCTTAAAGGCGCGGAAAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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