The detailed information of tRNA gene sequence


Sequence ID>W1610000287
Genome IDAASJ01000002
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum pendens Hrk 5 [AASJ]
Start position on genome 56097
End posion on genome 56010
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctaacgcgcg
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGACCAAGGCGATGGCCTGGAGAGCCATTACCCGTTAAGGGTGC
CCGGGTTCGAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
ttctccgatc
Secondary structure (Cloverleaf model)
>W1610000287	Ser	GGA
                   g      GCCA ttctccgatc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C C G G G     C
    G         | | |                 T T
    A       A G G C
      C C A        G     TACCCGTTAAGGGTGC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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