The detailed information of tRNA gene sequence


Sequence ID>W1610000289
Genome IDAAVI01000002
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 12994
End posion on genome 13068
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtgtgctga
tRNA gene sequence 
GGACCCGTCGTCTAGCCTGGTTAGGACGCAGCCCTCACACGGCTGAGGTCGAGGGTTCAA
ATCCCTCCGGGTCCAtct
Downstream region at tRNA end position 
ttttacgata
Secondary structure (Cloverleaf model)
>W1610000289	Val	CAC
                   a      Atct ttttacgata
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       G A G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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