The detailed information of tRNA gene sequence


Sequence ID>W1610000290
Genome IDAAVI01000003
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 8949
End posion on genome 9024
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaagttgagc
tRNA gene sequence 
GGGGCCGTCGTCTAGTTTGGTCCAGGACGCCAGGCTTGGGCCCTGGTAATCGGGGGTTCA
AATCCCCTCGGCCCCAtct
Downstream region at tRNA end position 
tgacggctta
Secondary structure (Cloverleaf model)
>W1610000290	Pro	TGG
                   c      Atct tgacggctta
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
    T T G A        C      + | | | |     A
  T         T C T G       G G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        G     TAATC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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