The detailed information of tRNA gene sequence


Sequence ID>W1610000291
Genome IDAAVI01000003
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 100307
End posion on genome 100393
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
taaatgttgT
tRNA gene sequence 
GCGGGGGTGCCCGAGCTAGGCCAAAGGGGGTAGGCTTAGGCCCTACTGGAGTAGTCCTGC
GCGGGTTCAAATCCCGCCCCCCGCATgc
Downstream region at tRNA end position 
ctctcgcgtg
Secondary structure (Cloverleaf model)
>W1610000291	Leu	TAG
                   T      ATgc ctctcgcgtg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        G      | | | | |     A
  A         G C C C       G C G G G     C
  G           | | |                 T T
  G         A G G G
    C C A A        G     TGGAGTAGTCCTGC
                    G - C
                    T - A
                    A - T
                    G - C
                    G - C
                  C       C
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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