The detailed information of tRNA gene sequence


Sequence ID>W1610000292
Genome IDAAVI01000003
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 231318
End posion on genome 231241
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caatccatgt
tRNA gene sequence 
GCGGCCGTAGTCTAGCCTGGTTAGGACGCTGGCCTTCCAAGCCAGAAGTCCCGGGTTCAA
ATCCCGGCGGTCGCACCA
Downstream region at tRNA end position 
ttcaggatcc
Secondary structure (Cloverleaf model)
>W1610000292	Gly	TCC
                   t      ACCA ttcaggatcc
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AAGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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