The detailed information of tRNA gene sequence


Sequence ID>W1610000296
Genome IDAAVI01000005
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 172743
End posion on genome 172652
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgaagtatgT
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGCGCTCGGCTTGCAACCCACGGGCAGGATACCGAGA
GGTCCCCGGGTTCAAATCCCGGCCGGTCCATac
Downstream region at tRNA end position 
tattttatga
Secondary structure (Cloverleaf model)
>W1610000296	Ala	TGC
                   T      ATac tattttatga
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     GGGCAGGATACCGAGAGGTCC
                    C   C
                    T - A
                    C   C
                    G - C
                    G - C
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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