The detailed information of tRNA gene sequence


Sequence ID>W1610000299
Genome IDAAVI01000008
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 12973
End posion on genome 13047
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atcttatact
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGTGCGCGGTTGGCATCCGCGAGGTCCCGGGTTCAAA
TCCCGGCCGGTCCACtt
Downstream region at tRNA end position 
caccgttacg
Secondary structure (Cloverleaf model)
>W1610000299	Ala	GGC
                   t      ACtt caccgttacg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | +                 T T
    G       G A G T
      G A A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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