The detailed information of tRNA gene sequence


Sequence ID>W1610000300
Genome IDAAVI01000008
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 45711
End posion on genome 45787
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agggtgaagt
tRNA gene sequence 
GGGCCCGTAGCTCAGCTAGGTAGAGCGCGCGGCTCATAACCGCGTGGTCGAGGGTTCAAA
TCCCTCCGGGCCCACGA
Downstream region at tRNA end position 
aatagcaaaa
Secondary structure (Cloverleaf model)
>W1610000300	Met	CAT
                   t      ACGA aatagcaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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