The detailed information of tRNA gene sequence


Sequence ID>W1610000301
Genome IDAAVI01000008
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 49787
End posion on genome 49861
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tagaacttga
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTTAGGATGCCGCTCTGACACAGCGGAGGTCCTGGGTTCAA
ATCCCAGCGGGCCCAtac
Downstream region at tRNA end position 
ttccttgttc
Secondary structure (Cloverleaf model)
>W1610000301	Val	GAC
                   a      Atac ttccttgttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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