The detailed information of tRNA gene sequence


Sequence ID>W1610000305
Genome IDAAVI01000010
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 2392
End posion on genome 2315
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tatttagagt
tRNA gene sequence 
GCGGCCGTAGTCCAGCCTGGTTAGGACGCTGGCCTCCCAAGCCAGAGATCCCGGGTTCAA
ATCCCGGCGGTCGCACTA
Downstream region at tRNA end position 
aattcttttt
Secondary structure (Cloverleaf model)
>W1610000305	Gly	CCC
                   t      ACTA aattcttttt
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         C C T G       C C G G G     C
  G         | | | |                 T T
  G         G G A C
    T T A          G     AGATC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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