The detailed information of tRNA gene sequence


Sequence ID>W1610000306
Genome IDAAVI01000010
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 1683
End posion on genome 1594
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gtagtttcgT
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGGAGAGCACCCGGCTGAAGACTTCGGTATAGAGACCGGGTT
GTCCGGGGTTCAAGTCCCCGCGGCGGCATtt
Downstream region at tRNA end position 
cttgaatttt
Secondary structure (Cloverleaf model)
>W1610000306	Phe	GAA
                   T      ATtt cttgaatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        A     GTATAGAGACCGGGTTGTC
                    C - G
                    C   C
                    C   T
                    G + T
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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