The detailed information of tRNA gene sequence


Sequence ID>W1610000307
Genome IDAAVI01000011
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 25171
End posion on genome 25248
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atattaatat
tRNA gene sequence 
GCCGCAGTAGTCTAGCCCGGTCTAGGATGGGGGCCTGTCGAGCCCCTGACCCGGGTTCAA
ATCCCGGCTGCGGCGCCT
Downstream region at tRNA end position 
ttcattttaa
Secondary structure (Cloverleaf model)
>W1610000307	Asp	GTC
                   t      GCCT ttcattttaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T C T A        G     TGAC
                    G - C
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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