The detailed information of tRNA gene sequence


Sequence ID>W1610000308
Genome IDAAVI01000011
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 27592
End posion on genome 27517
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
attcctaatt
tRNA gene sequence 
AGCCGGGTAGTCTAGCGGCCAAGGATCCAGGGCTTTGGCCCCTGGGACCAGGGTTCGAAT
CCCTGCCCGGCTACCT
Downstream region at tRNA end position 
cctcgtgatt
Secondary structure (Cloverleaf model)
>W1610000308	Gln	TTG
                   t      ACCT cctcgtgatt
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | | | | |     G
    G       T C T G       C A G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        C     GGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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