The detailed information of tRNA gene sequence


Sequence ID>W1610000310
Genome IDAAVI01000015
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula DSM 5348 [AAVI]
Start position on genome 18172
End posion on genome 18086
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aattttccat
tRNA gene sequence 
GCCGCTGTAGCTCAGCTGGTAGAGCGCCGGCCTCGTATCCCTGGAGAGATAGCCGGTGGT
CGCGGGTTCAAATCCCGCCGGCGGCTCat
Downstream region at tRNA end position 
tggtgattct
Secondary structure (Cloverleaf model)
>W1610000310	Thr	CGT
                   t      TCat tggtgattct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GAGAGATAGCCGGTGGTC
                    C - G
                    C   T
                    G - C
                    G - C
                    C   C
                  C       T
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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