The detailed information of tRNA gene sequence


Sequence ID>W1610000311
Genome IDAAWI01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis C5 [AAWI]
Start position on genome 4161
End posion on genome 4237
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagctgaatt
tRNA gene sequence 
GGGCTGATAGCTCAGACTGGGAGAGTACCGCATTGGCTATGCGGAAGCCGCGGGTTCAAA
TCCCGCTCAGTCCACCT
Downstream region at tRNA end position 
aatttatttt
Secondary structure (Cloverleaf model)
>W1610000311	Ala	GGC
                   t      ACCT aatttatttt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     A - T          T A
                    T     C G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    T       | | | +                 T T
    G       G A G T
      G G A        A     AAGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       T
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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