The detailed information of tRNA gene sequence


Sequence ID>W1610000314
Genome IDAAWI01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis C5 [AAWI]
Start position on genome 642440
End posion on genome 642354
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttgttcgT
tRNA gene sequence 
GCGGAGATGGCCCAGCCTGGTACGGCGCGGGACTGCTAATCCCGTTACTCTCTGAGTAAC
CCGAGTTCAAATCTCGGTCTCCGCGTtt
Downstream region at tRNA end position 
ctctttttac
Secondary structure (Cloverleaf model)
>W1610000314	Ser	GCT
                   T      GTtt ctctttttac
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G G C T C     A
      C G A        G      | | | | |     A
    C       C C C G       C C G A G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TTACTCTCTGAGTAAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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