The detailed information of tRNA gene sequence


Sequence ID>W1610000333
Genome IDAAWI01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis C5 [AAWI]
Start position on genome 257309
End posion on genome 257382
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
ctattcagac
tRNA gene sequence 
GGGGCCGTGGGGTAGCCTGGCCATCCTGTGCGTCTGGGGGGCGTGCAACCCGAGTTCGAA
TCTCGGCGGCCCCAttt
Downstream region at tRNA end position 
tttattaatc
Secondary structure (Cloverleaf model)
>W1610000333	Pseudo	GGG
                   c      Attt tttattaatc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
      C G A        G      | | | | |     G
    C       T G G G       C C G A G     C
    T       | + | |                 T T
    G       A T C C
      G C C        T     GCAAC
                    G + T
                    T + G
                    G - C
                    C - G
                    G   G
                  T       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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