The detailed information of tRNA gene sequence


Sequence ID>W1610000334
Genome IDAAWI01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis C5 [AAWI]
Start position on genome 253251
End posion on genome 253178
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taggaaatgt
tRNA gene sequence 
GCCAAGGTAGTCTAGTCCGGCGAGGCAGCGGACTGCAGATCCGCTTCAGAGGGGTTCAAA
TCCCTTCCTTGGCTttt
Downstream region at tRNA end position 
ttattttgga
Secondary structure (Cloverleaf model)
>W1610000334	Cys	GCA
                   t      Tttt ttattttgga
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | + | | |     A
    C       T C T G       A G G G G     C
    C       | | + |                 T T
    G       A G G C
      G C G        A     TTCAG
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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