The detailed information of tRNA gene sequence


Sequence ID>W1610000383
Genome IDAAXQ01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [AAXQ]
Start position on genome 111211
End posion on genome 111300
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatgagaacc
tRNA gene sequence 
GCCGGGGTGGCCGAGCCTGGTCCAAGGCGCGGGACTCGAGATCCCGTCCCCGCAAAGGGG
GCCCGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
atttaatctc
Secondary structure (Cloverleaf model)
>W1610000383	Ser	CGA
                   c      GCCA atttaatctc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         G C C G       C C G G G     C
  G           | | |                 T T
  G         A G G C
    T C C A        G     TCCCCGCAAAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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