The detailed information of tRNA gene sequence


Sequence ID>W1610000511
Genome IDABEB01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [ABEB]
Start position on genome 319699
End posion on genome 319625
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcgctgttT
tRNA gene sequence 
GCCCGGATGGTGTAGTGGCCCATCATACGACCCTGTCACGGTCGTGACGCGGGTTCAAAT
CCCGCTCCGGGCGTtt
Downstream region at tRNA end position 
tcgacgaaca
Secondary structure (Cloverleaf model)
>W1610000511	Asp	GTC
                   T      GTtt tcgacgaaca
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       T G T G       G C G G G     C
    G         | | +                 T T
    C       T C A T
      C C A        A     TGAC
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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