The detailed information of tRNA gene sequence


Sequence ID>W1610000512
Genome IDABEB01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [ABEB]
Start position on genome 316089
End posion on genome 316016
Amino Acid Pseudo
Anticodon GCG
Upstream region at tRNA start position 
gtctattcga
tRNA gene sequence 
GTCCTGGTAGGGTAGTGGACTATCCTCCTGGCTTGCGGAGCCAGGGACCGGAGTTCAAAT
CTCCGTCAGGACGCtc
Downstream region at tRNA end position 
actttgcggc
Secondary structure (Cloverleaf model)
>W1610000512	Pseudo	GCG
                   a      GCtc actttgcggc
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     G + T          T A
                    T     G C C T C     A
      T G A        A      | | | | |     A
    G       T G G G       C G G A G     C
    G         | | +                 T T
    A       T C C T
      C T A        C     GGAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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