The detailed information of tRNA gene sequence


Sequence ID>W1610000523
Genome IDABEB01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [ABEB]
Start position on genome 100726
End posion on genome 100642
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cataggtcgc
tRNA gene sequence 
GCGCGGGTTGCCGAGCCAGGCCAAAGGCGTAGCGCTTAGGACGCTATGGTGTAGACCTCC
GCAGGTTCGAATCCTGTCCCGCGCAtac
Downstream region at tRNA end position 
tgcctcgaac
Secondary structure (Cloverleaf model)
>W1610000523	Leu	TAG
                   c      Atac tgcctcgaac
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C C G A        T      + | | | |     G
  A         G C C G       G C A G G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TGGTGTAGACCTCC
                    T - A
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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