The detailed information of tRNA gene sequence


Sequence ID>W1610000525
Genome IDABEB01000009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [ABEB]
Start position on genome 59282
End posion on genome 59354
Amino Acid Pseudo
Anticodon CTG
Upstream region at tRNA start position 
gagtgcgcac
tRNA gene sequence 
AGTCCATTGGGGTAGTGGCCAATCCTGTTGCCTTCTGGGGGCAACGACCCTGGTTCGAAT
CCAGGATGGACTAttc
Downstream region at tRNA end position 
tcgcggttcg
Secondary structure (Cloverleaf model)
>W1610000525	Pseudo	CTG
                   c      Attc tcgcggttcg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     G G A C C     A
      T G A        G      | | | | |     G
    G       T G G G       C C T G G     C
    G         | | +                 T T
    C       T C C T
      C A A        G     CGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       G
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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