The detailed information of tRNA gene sequence


Sequence ID>W1610000681
Genome IDABSD01000045
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Aciduliprofundum boonei T469 [ABSD]
Start position on genome 6698
End posion on genome 6783
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccttttgcga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCAGGCAAGGCGGTGGATTCGAGATCCACTGGGCCCTGCCCTCGG
GAGTTCAAATCTCCCCCTCGGCGCTA
Downstream region at tRNA end position 
cgcttatata
Secondary structure (Cloverleaf model)
>W1610000681	Ser	CGA
                   a      GCTA cgcttatata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    C       T C C G       G G G A G     C
    A       | | | |                 T T
    G       A G G C
      G C A        G     TGGGCCCTGCCCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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