The detailed information of tRNA gene sequence


Sequence ID>W1610000847
Genome IDABTZ01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus utahensis DSM 12940 [ABTZ]
Start position on genome 3094827
End posion on genome 3094900
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
ttcgaatcac
tRNA gene sequence 
GGGACCGTAGGGTAGCGGTATCCTCGGCGCATGGGGTGCGTCGGACCCGAGTTCGAATCT
CGGCGGCCCCACTA
Downstream region at tRNA end position 
caaccacctt
Secondary structure (Cloverleaf model)
>W1610000847	Pseudo	GGG
                   c      ACTA caaccacctt
                     G - C
                     G - C
                     G - C
                     A   C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
        G A        A      | | | | |     G
      C     T G G G       C C G A G     C
      G       | | +                 T T
      G     T C C T
        T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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