The detailed information of tRNA gene sequence


Sequence ID>W1610000878
Genome IDABXN01000011
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. AM4 [ABXN]
Start position on genome 54290
End posion on genome 54367
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
acggttccga
tRNA gene sequence 
GGGCCGGTGGCCTAGCCTGGATGGGGCGTCGGCCTTCGGAGCCGAAGGTCGCGGGTTCAA
ATCCCGCCCGGCCCGCCA
Downstream region at tRNA end position 
tcgaaacttt
Secondary structure (Cloverleaf model)
>W1610000878	Arg	TCG
                   a      GCCA tcgaaacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     A
  T         T C C G       G C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T G          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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