The detailed information of tRNA gene sequence


Sequence ID>W1610000882
Genome IDABXN01000012
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. AM4 [ABXN]
Start position on genome 156454
End posion on genome 156540
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attggtgagc
tRNA gene sequence 
GCCGGGGTAGCCTAGCCTGGGAAGGCGCGGGACTCGAGATCCCGTGGGCGTCCGCCCACC
AGGGTTCAAATCCCTGCCCCGGCGCCA
Downstream region at tRNA end position 
aacaaactgc
Secondary structure (Cloverleaf model)
>W1610000882	Ser	CGA
                   c      GCCA aacaaactgc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C A G G G     C
    T       | | | |                 T T
    G       A G G C
      G G A        G     TGGGCGTCCGCCCAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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