The detailed information of tRNA gene sequence


Sequence ID>W1610000905
Genome IDABXN01000014
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. AM4 [ABXN]
Start position on genome 246871
End posion on genome 246794
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agcgggcagt
tRNA gene sequence 
GGACCGGTAGCCTAGCCAGGATAGGGCGGCGGCCTCCTAAGCCGCAGGTCCGGGGTTCGA
AGCCCCGCCGGTCCGCCA
Downstream region at tRNA end position 
gttttaacgt
Secondary structure (Cloverleaf model)
>W1610000905	Arg	CCT
                   t      GCCA gttttaacgt
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          G A
                    T     G C C C C     A
    C C G A        A      | | | | |     G
  A         T C C G       C G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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