The detailed information of tRNA gene sequence


Sequence ID>W1610000944
Genome IDABYV02000011
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter smithii DSM 2374 [ABYV]
Start position on genome 85639
End posion on genome 85565
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
tattttttgt
tRNA gene sequence 
GGCAAGCTGACCGAGCGGCTTAGGTGCGTGGCTGCAGACCATGATACTGGGGTTCAAATC
CCTAGCTTGCCTTCA
Downstream region at tRNA end position 
tttattaatt
Secondary structure (Cloverleaf model)
>W1610000944	Pseudo	GCA
                   t      TTCA tttattaatt
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      C G A        G      | + | | |     A
    G       G C C A       T G G G G     C
    G         | | |                 T T
    C       A G G T
      T T          G     ATAC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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