The detailed information of tRNA gene sequence


Sequence ID>W1610000993
Genome IDABZB01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris palustris E1-9c [ABZB]
Start position on genome 329755
End posion on genome 329837
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aagtacagac
tRNA gene sequence 
GCGGGGATAACCAAGAGGCCAAAGGTGGGCGCCTCAAGAGCGTCTCTCGCAGGAGTTCAA
GGGTTCGAATCCCTTTCCCCGCAtct
Downstream region at tRNA end position 
gcgatcacac
Secondary structure (Cloverleaf model)
>W1610000993	Leu	CAA
                   c      Atct gcgatcacac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T T C C C     A
      A G A        A      | | | | |     G
    G       A C C A       A A G G G     C
    G         | | |                 T T
    C       A G G T
      C A A        G     TCTCGCAGGAGTTC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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