The detailed information of tRNA gene sequence


Sequence ID>W1610001142
Genome IDACQY01000005
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [ACQY]
Start position on genome 61242
End posion on genome 61330
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatttttga
tRNA gene sequence 
GCAGGGGTAGCCAAGCCCGGCTAAGGCGCTGGACTTGAGATCCAGTGGGGCCTTGCCCCG
CCTGGGTTCAAATCCCAGCCCCTGCGCCA
Downstream region at tRNA end position 
ttggtttttt
Secondary structure (Cloverleaf model)
>W1610001142	Ser	TGA
                   a      GCCA ttggtttttt
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C C G A        A      | | | | |     A
  C         A C C G       C T G G G     C
  G           | | |                 T T
  G         A G G C
    C T A          G     TGGGGCCTTGCCCCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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