The detailed information of tRNA gene sequence


Sequence ID>W1610001623
Genome IDADCA01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [ADCA] FS406-22 [ADCA]
Start position on genome 28901
End posion on genome 28977
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctttttaac
tRNA gene sequence 
GGGGCCGTGGGGTAGCCTGGACATCCTGTGCGCTTGGGGGGCGTGCGACCCGGGTTCAAG
TCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
ttcatatttt
Secondary structure (Cloverleaf model)
>W1610001623	Pro	GGG
                   c      ACCA ttcatatttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       T G G G       C C G G G     C
    T       | + | |                 T T
    G       A T C C
      G A C        T     GCGAC
                    G + T
                    T + G
                    G - C
                    C - G
                    G   G
                  C       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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