The detailed information of tRNA gene sequence


Sequence ID>W1610001627
Genome IDADCA01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [ADCA] FS406-22 [ADCA]
Start position on genome 119894
End posion on genome 119818
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gctattttgt
tRNA gene sequence 
GGGCTGGTAGCTCAGACTGGGAGAGCGCCGCATTGGCTGTGCGGAGGCCGCGGGTTCAAA
TCCCGCCCAGTCCACCA
Downstream region at tRNA end position 
ttttttctgg
Secondary structure (Cloverleaf model)
>W1610001627	Ala	GGC
                   t      ACCA ttttttctgg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       G
                  T       T
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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